Common interface to enrichment/over-representation
Usage
functional_api(dds, method, source, ...)
Arguments
- dds
a DESeq2 object with thre results stored in the mcols
- method
'or' for over-representation, or 'enrichment' for geneset enrichment
- source
'GO' or 'Reactome'
- ...
extra arguments for the analysis
Value
The clusterProfiler object
Details
Give a unified interface to all the supported functional
methods, and all the databases