Class Mouse_X

java.lang.Object

java.awt.event.MouseAdapter

Mouse_X

All Implemented Interfaces:

ij.plugin.filter.PlugInFilter, MouseListener, MouseMotionListener, MouseWheelListener, EventListener

public class Mouse_X
extends MouseAdapter
implements ij.plugin.filter.PlugInFilter

updated 5/9/2014: Uses the correct dimensions for the image and preserves slice labels. updated 5/8/2014: When the output image is created it loops through all of the images in the image stack, not just all of the slices. A plugin for collecting a rectangular region by cropping and rotating the region. For RGB images bilinear interpolation is used, for Anything else, the default interpolation is used.

Field Summary

Fields inherited from interface ij.plugin.filter.PlugInFilter

CONVERT_TO_FLOAT, DOES_16, DOES_32, DOES_8C, DOES_8G, DOES_ALL, DOES_RGB, DOES_STACKS, DONE, FINAL_PROCESSING, KEEP_THRESHOLD, NO_CHANGES, NO_IMAGE_REQUIRED, NO_UNDO, NO_UNDO_RESET, PARALLELIZE_IMAGES, PARALLELIZE_STACKS, ROI_REQUIRED, SNAPSHOT, STACK_REQUIRED, SUPPORTS_MASKING

Constructor Summary

Constructors

Constructor and Description
Mouse_X()

Method Summary

Modifier and Type	Method and Description
void	createCroppedImage(int width, int height, double[][] cnet_map) Creates the rotated image by mapping the values located in cnet_map to a new rectangular image.
void	createCroppedImageRGB(int width, int height, double[][] cnet_map) RGB version that interpolates each pixel of the int array separately, this uses bi-linear interpolation...I hope
void	createOvula() This sizes out the rectangle and then gets the pixel values in the image then plots them onto a new image stack
void	mouseClicked(MouseEvent evt)
void	mouseMoved(MouseEvent evt) During 'state 3' we draw the bounding rectangle to show the area that will be cropped and rotated.
void	run(ij.process.ImageProcessor ip) This will create a new image plus to draw on so that you can click on the canvas to select the four points necessary
int	setup(String arg, ij.ImagePlus imp)

Methods inherited from class java.awt.event.MouseAdapter

mouseDragged, mouseEntered, mouseExited, mousePressed, mouseReleased, mouseWheelMoved

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Mouse_X

public Mouse_X()

Method Detail

setup

public int setup(String arg,
                 ij.ImagePlus imp)

Specified by:

setup in interface ij.plugin.filter.PlugInFilter

run

public void run(ij.process.ImageProcessor ip)

This will create a new image plus to draw on so that you can click on the canvas to select the four points necessary

Specified by:

run in interface ij.plugin.filter.PlugInFilter

mouseClicked

public void mouseClicked(MouseEvent evt)

Specified by:

mouseClicked in interface MouseListener

Overrides:

mouseClicked in class MouseAdapter

mouseMoved

public void mouseMoved(MouseEvent evt)

During 'state 3' we draw the bounding rectangle to show the area that will be cropped and rotated.

Specified by:

mouseMoved in interface MouseMotionListener

Overrides:

mouseMoved in class MouseAdapter

createOvula

public void createOvula()

This sizes out the rectangle and then gets the pixel values in the image then plots them onto a new image stack

createCroppedImage

public void createCroppedImage(int width,
                               int height,
                               double[][] cnet_map)

Creates the rotated image by mapping the values located in cnet_map to a new rectangular image.

Parameters:

width - width of new image

height - of new image

cnet_map - coordinate map.

createCroppedImageRGB

public void createCroppedImageRGB(int width,
                                  int height,
                                  double[][] cnet_map)

RGB version that interpolates each pixel of the int array separately, this uses bi-linear interpolation...I hope

Parameters:

width - width of new image

height - of new image

cnet_map - coordinate map.