Hierarchy For All Packages

Package Hierarchies:

• deformablemesh,
• deformablemesh.examples,
• deformablemesh.externalenergies,
• deformablemesh.geometry,
• deformablemesh.geometry.modifier,
• deformablemesh.gui,
• deformablemesh.gui.meshinitialization,
• deformablemesh.gui.render2d,
• deformablemesh.io,
• deformablemesh.meshview,
• deformablemesh.ringdetection,
• deformablemesh.simulations,
• deformablemesh.track,
• deformablemesh.util,
• deformablemesh.util.actions,
• deformablemesh.util.astar,
• deformablemesh.util.connectedcomponents

Class Hierarchy

• java.lang.Object
  • deformablemesh.util.actions.ActionStack
  • deformablemesh.geometry.AngleGenerator (implements java.util.Iterator<E>)
  • deformablemesh.meshview.Arrow (implements deformablemesh.meshview.DataObject)
  • deformablemesh.util.astar.AStarBasic<T>
  • deformablemesh.util.astar.AStarXY
  • deformablemesh.meshview.Axis3D (implements deformablemesh.meshview.DataObject)
  • deformablemesh.externalenergies.BallooningEnergy (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.geometry.BinaryInterceptible (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.geometry.BinaryMeshGenerator
  • deformablemesh.geometry.BinaryMomentsOfInertia
  • deformablemesh.geometry.Box3D (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.util.connectedcomponents.BoxRegionConnectedComponents
  • deformablemesh.meshview.ChannelVolume (implements deformablemesh.gui.FrameListener)
  • deformablemesh.gui.meshinitialization.CircularMeshInitializationDialog (implements deformablemesh.gui.FrameListener)
  • deformablemesh.util.ColorSuggestions
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Canvas (implements javax.accessibility.Accessible)
      • org.scijava.java3d.Canvas3D
        • deformablemesh.meshview.DataCanvas
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • deformablemesh.gui.FurrowInput
          • deformablemesh.gui.ParameterControl
            • deformablemesh.gui.ParameterCombo
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • deformablemesh.gui.meshinitialization.FurrowInitializer
            • deformablemesh.gui.meshinitialization.RectangleMeshInitializingDialog
  • deformablemesh.geometry.CompositeInterceptables (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.util.connectedcomponents.ConnectedComponents2D
  • deformablemesh.util.connectedcomponents.ConnectedComponents3D
  • deformablemesh.geometry.Connection3D
  • deformablemesh.geometry.ConnectionRemesher
  • deformablemesh.meshview.ContractileRingDataObject (implements deformablemesh.meshview.DataObject)
  • deformablemesh.ringdetection.ContractileRingDetector (implements java.lang.Iterable<T>)
  • deformablemesh.gui.ControlFrame (implements deformablemesh.gui.FrameListener, deformablemesh.gui.ReadyObserver)
  • deformablemesh.util.Create3DTrainingDataFromMeshes
  • deformablemesh.examples.CreateCrossSectionMovies
  • deformablemesh.geometry.CurvatureCalculator
  • deformablemesh.geometry.DeformableLine3D
  • deformablemesh.geometry.DeformableMesh3D
    • deformablemesh.geometry.NewtonMesh3D
  • deformablemesh.DeformableMesh3DTools
  • deformablemesh.meshview.DeformableMeshDataObject (implements deformablemesh.meshview.DataObject)
    • deformablemesh.meshview.TexturedPlaneDataObject
  • deformablemesh.Deforming3DMesh_Plugin (implements ij.plugin.filter.PlugInFilter)
  • DeformingMesh3DApp
  • DeformingMeshSans3D (implements ij.plugin.PlugIn)
  • deformablemesh.util.DistanceTransformMosaicImage
  • deformablemesh.simulations.FillingBinaryImage
  • deformablemesh.track.FrameToFrameDisplacement
  • deformablemesh.geometry.Furrow3D (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.meshview.FurrowPlaneDataObject (implements deformablemesh.meshview.DataObject)
  • deformablemesh.ringdetection.FurrowTransformer
  • deformablemesh.io.FurrowWriter
  • deformablemesh.util.GaussianKernels
  • deformablemesh.externalenergies.GradientEnergy (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.util.GroupDynamics
  • deformablemesh.simulations.GrowingDroplet
  • deformablemesh.gui.GuiTools
  • deformablemesh.gui.GuiTools.LocaleNumericTextField
  • Headless3DApp
  • deformablemesh.simulations.HeightMapSurface (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.util.HotAndCold (implements deformablemesh.util.ColorInterpolator)
  • deformablemesh.meshview.HotKeyDelegate
  • deformablemesh.geometry.InsideOutInterceptable (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.externalenergies.IntensityEnergy (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.gui.IntensityRanges
  • deformablemesh.geometry.InterceptingMesh3D (implements deformablemesh.geometry.Interceptable)
  • deformablemesh.geometry.Intersection
  • deformablemesh.util.KMeansThresholder
  • deformablemesh.meshview.LineDataObject (implements deformablemesh.meshview.DataObject)
  • deformablemesh.geometry.LineNetwork
  • deformablemesh.simulations.ManyDrops
  • deformablemesh.util.MeshAnalysis
  • deformablemesh.util.MeshComparisons
  • deformablemesh.MeshDetector
  • deformablemesh.util.MeshFaceObscuring
  • deformablemesh.meshview.MeshFrame3D
  • deformablemesh.util.MeshGroup
  • deformablemesh.util.MeshImageOps
  • deformablemesh.MeshImageStack
    • deformablemesh.MeshImageSubStack
  • deformablemesh.geometry.modifier.MeshModifier
  • deformablemesh.io.MeshReader
  • deformablemesh.track.MeshTracker
  • deformablemesh.track.MeshTrackManager (implements deformablemesh.util.actions.StateListener)
  • deformablemesh.meshview.MeshViewer
  • deformablemesh.io.MeshWriter
  • java.awt.event.MouseAdapter (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
    • deformablemesh.meshview.CanvasController
    • Mouse_X (implements ij.plugin.filter.PlugInFilter)
  • deformablemesh.geometry.Node3D
  • deformablemesh.externalenergies.NodeAttractor (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.externalenergies.ParabolicSurface (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.externalenergies.PerpendicularGradientEnergy (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.externalenergies.PerpendicularIntensityEnergy (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.meshview.PickSelector (implements deformablemesh.meshview.CanvasView)
  • deformablemesh.util.connectedcomponents.PixelSet
  • deformablemesh.examples.PlotAverageIntensities
  • deformablemesh.meshview.PlotSurface (implements deformablemesh.meshview.DataObject)
  • deformablemesh.externalenergies.PressureForce (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.geometry.ProjectableMesh (implements deformablemesh.geometry.Projectable)
  • deformablemesh.util.ProjectionSurfacePlot
  • deformablemesh.gui.PropertySaver
  • deformablemesh.geometry.RayCastMesh
  • deformablemesh.gui.render2d.RaycastRender (implements java.lang.Runnable)
  • deformablemesh.util.connectedcomponents.Region
  • deformablemesh.util.connectedcomponents.RegionGrowing
  • deformablemesh.gui.render2d.RenderFrame2D
  • deformablemesh.gui.RingController (implements deformablemesh.gui.FrameListener, javax.swing.event.ListDataListener)
  • org.scijava.java3d.SceneGraphObject
    • org.scijava.java3d.NodeComponent
      • org.scijava.java3d.Texture
        • org.scijava.java3d.Texture3D
          • deformablemesh.meshview.MultiChannelVolumeTexture
          • deformablemesh.meshview.VolumeTexture
  • deformablemesh.SegmentationController
  • deformablemesh.SegmentationModel
  • deformablemesh.geometry.modifier.Selector (implements deformablemesh.geometry.modifier.ModificationState)
  • deformablemesh.geometry.ShellMesh
  • deformablemesh.util.connectedcomponents.ShrinkRegion
  • deformablemesh.meshview.Sizeable3DSurface (implements deformablemesh.meshview.DataObject)
  • deformablemesh.gui.Slice3DView
  • deformablemesh.gui.meshinitialization.SlicePicker
  • deformablemesh.externalenergies.SmoothingForce (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.geometry.Sphere (implements deformablemesh.geometry.Interceptable, deformablemesh.geometry.Projectable)
  • deformablemesh.meshview.SphereDataObject (implements deformablemesh.meshview.DataObject)
  • deformablemesh.geometry.SpherePathTesting
  • deformablemesh.simulations.SphericalCavity
  • deformablemesh.examples.StabilizeMeshes
  • deformablemesh.externalenergies.StericMesh (implements deformablemesh.externalenergies.ExternalEnergy)
    • deformablemesh.externalenergies.SofterStericMesh
  • deformablemesh.util.SurfacePlot
    • deformablemesh.util.CurvatureSurfacePlot
    • deformablemesh.util.IntensitySurfacePlot
  • deformablemesh.gui.SwingJSTerm
  • deformablemesh.gui.meshinitialization.ThreeDCursor
  • deformablemesh.track.Track
  • deformablemesh.util.TrackAnalysis
  • deformablemesh.io.TrackMateAdapter
  • deformablemesh.geometry.Triangle3D
  • deformablemesh.externalenergies.TriangleAreaDistributor (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.simulations.TwoDrops
  • deformablemesh.util.Vector3DOps
  • deformablemesh.meshview.VectorField (implements deformablemesh.meshview.DataObject)
  • deformablemesh.externalenergies.VolumeConservation (implements deformablemesh.externalenergies.ExternalEnergy)
  • deformablemesh.meshview.VolumeContrastSetter
  • deformablemesh.meshview.VolumeDataObject (implements deformablemesh.meshview.DataObject)
  • deformablemesh.simulations.WavesOnASheet
  • deformablemesh.geometry.WireframeMesh

Interface Hierarchy

• deformablemesh.util.astar.BasicCost<T>
• deformablemesh.util.astar.BasicHeuristic<T>
• deformablemesh.util.astar.Boundary<T>
• deformablemesh.meshview.CanvasView
• deformablemesh.util.astar.ChoiceGenerator<T>
• deformablemesh.util.ColorInterpolator
• deformablemesh.meshview.DataCanvas.ViewListener
• deformablemesh.meshview.DataObject
• deformablemesh.gui.Drawable
• deformablemesh.externalenergies.ExternalEnergy
• deformablemesh.gui.FrameListener
• deformablemesh.gui.FurrowInput.PlaneChangeListener
• deformablemesh.util.astar.History<T>
• deformablemesh.gui.IntensityRanges.Contrastable
• deformablemesh.geometry.Interceptable
• deformablemesh.meshview.MeshFrame3D.HudDisplay
• deformablemesh.geometry.modifier.ModificationState
• deformablemesh.util.astar.PossiblePath<T>
• deformablemesh.geometry.Projectable
• deformablemesh.gui.ReadyObserver
• deformablemesh.SegmentationController.Executable
• deformablemesh.gui.SetValue
• deformablemesh.util.actions.StateListener
• deformablemesh.util.actions.UndoableActions

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • deformablemesh.externalenergies.ImageEnergyType
    • deformablemesh.io.ImportType